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CELEBRATIONS
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PRESENTATIONS
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PUBLICATIONS
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Presentations given by my undergraduate research students at conferences, bold indicates presenting author.
2011
Samuel Irving (UCLA), “Characterizing Mitochondrial Protein Import in Mammalian cells using Small Molecule Modulators”. Poster presentation, Science Poster Day, UCLA Deans award winner
2012
Robert McMickle (LMU) and Tanya Hioe (UCLA), “Characterization of Yml, a putative anaerobic electron acceptor of the mitochondrial IMS oxidative protein folding pathway”
Tanya Hioe (UCLA), “MitoBLoCK-5,a Polychlorinated Biphenyl compound (PCB) is a specific inhibitor of Erv1” Poster presentation, UCLA Undergraduate Research Symposium, UCLA
- Poster presentation, Loyola Marymount University Undergraduate Research Symposium
- Poster presentation, West Coast Biological Sciences Undergraduate Research Conference, Loyola Marymount University
Tanya Hioe (UCLA), “MitoBLoCK-5,a Polychlorinated Biphenyl compound (PCB) is a specific inhibitor of Erv1” Poster presentation, UCLA Undergraduate Research Symposium, UCLA
2013
Jaee Tamhane (LMU), “Characterization of Yml, a novel mitochondrial intermembrane space protein. Poster presentation, Southern California Conference for Undergraduate Research, Whittier College
Robert McMickle (LMU) and Tanya Hioe (UCLA), “Characterization of Yml, a new putative anaerobic electron acceptor of the mitochondrial IMS oxidative protein folding pathway”. Poster presentation, West Coast Biological Sciences Undergraduate Research Conference, Point Loma Nazrene University, San Diego
Robert McMickle (LMU) and Tanya Hioe (UCLA), “Characterization of Yml, a new putative anaerobic electron acceptor of the mitochondrial IMS oxidative protein folding pathway”. Poster presentation, West Coast Biological Sciences Undergraduate Research Conference, Point Loma Nazrene University, San Diego
2014
Jaee Tamhane and Joshua Rabang (LMU), “Characterization of a novel Erv1 interacting protein; Aim32”. Poster presentation, Loyola Marymount University Undergraduate Research Symposium
2015
Dissecting the role of a Mitochondrial Import Pathway in Neuronal Function. Biology Department Seminar Series, Loyola Marymount University. 2015
Michael Guerrero (LMU) and Lexi Alcaraz (LMU) “Characterization of MitoBloCK-5, an inhibitor of ALR in HeLa cells”.
Minh Luu (LMU) and Kevin Nguyen (LMU) “Characterization of Aim32p, a putative thioredoxin-like ferredoxin protein identified in the mitochondrial intermembrane space of yeast”.
Preparing for a Job Search in Academia. Preparing for Future Faculty Seminar series, Department of Chemistry and Biochemistry, UCLA. (2012-2015)
Michael Guerrero (LMU) and Lexi Alcaraz (LMU) “Characterization of MitoBloCK-5, an inhibitor of ALR in HeLa cells”.
- Poster presentation, Loyola Marymount University Undergraduate Research Symposium (March 2015) and,
- Poster presentation, West Coast Biological Sciences Undergraduate Research Conference, Point Loma Nazrene University (April 2015).
Minh Luu (LMU) and Kevin Nguyen (LMU) “Characterization of Aim32p, a putative thioredoxin-like ferredoxin protein identified in the mitochondrial intermembrane space of yeast”.
- Poster presentation, Loyola Marymount University Undergraduate Research Symposium (March 2015) and,
- Poster presentation, West Coast Biological Sciences Undergraduate Research Conference, Point Loma Nazrene University (April 2015).
Preparing for a Job Search in Academia. Preparing for Future Faculty Seminar series, Department of Chemistry and Biochemistry, UCLA. (2012-2015)
2016
Kevin Nguyen (LMU), Robert McMickle (LMU) and Tanya Hioe (UCLA) “Aim32p is a novel member of the Erv1 translocation pathway within the Mitochondrial Intermembrane Space of Saccharomyces cerevisiae”.
- Poster presentation, National Council for Undergraduate Research, Asheville, NC (April 2016),
- Poster presentation, ASBMB, San Diego (April 2015) and,
- Poster presentation, LMU Undergraduate Research Symposium (March 2015)
2017
Danyun (Vivian) Zhang (UCLA), Deepa Dabir (LMU), Carla Koehler (UCLA) “Using a small molecule to characterize mitochondrial intermembrane space proteins CHCHD2 and CHCHD10” Poster presentation, UCLA Mitochondria Symposium, 2017
2018
Bramble, Lily F., Cook, Makenzie M., LaBrie, Joseph.W., Dabir, Deepa V., & Almstedt, Hawley C. ”Analysis of Oral Contraceptive Use and Bone Turnover Markers in College-aged Females”. Poster presentation. Southwest American College of Sports Medicine Annual meeting, Costa Mesa, California, 2018
A.Torres Jr, S.A.L. Kennedy, D. Zhang, D. V. Dabir, C.M. Koehler, C.S. Malone, M. A. Teitell. “MitoBloCK-6 selectively induces apoptosis in human pluripotent stem cells”. Poster presentation, 14th Annual Stem Cell Symposium, UCLA, 2018
A.Torres Jr, S.A.L. Kennedy, D. Zhang, D. V. Dabir, C.M. Koehler, C.S. Malone, M. A. Teitell. “MitoBloCK-6 selectively induces apoptosis in human pluripotent stem cells”. Poster presentation, 14th Annual Stem Cell Symposium, UCLA, 2018
2019
Mikayla Sweitzer, Danyun Zhang, Owen R. Dailey, Carla M. Koehler, & Deepa V. Dabir “Characterization of Aim32, a novel [2Fe-2S] yeast mitochondrial protein”
- Oral presentation, LMU Undergraduate Research Symposium, LMU (March 2019)
- Best oral presentation award, West Coast Biological Sciences Undergraduate Research Conference, UCSD (March 2019)
- 2nd place award in overall research excellence, TriBeta Pacific Division Conference, UCSF (April 2019)
* denotes undergraduate students co-author
2000 - 2005
Goldbaum O., Oppermann M., Handschuh M., Dabir D.V., Zhang B., Forman M.S., Trojanowski J.Q., Lee V.M., and Richter-Landsberg C. (2003). Proteasome inhibition stabilizes tau inclusions in oligodendroglial cells that occur after treatment with okadaic acid. J Neurosci 23 (26): 8872-8880
Dabir D.V., Trojanowski J.Q., Richter-Landsberg C., Lee V.M., and Forman M.S. (2004) Expression of the small heat-shock protein alpha B-crystallin in tauopathies with glial pathology. Am J Pathol. 164 (1):155-166
Forman M.S., Lal D., Zhang B., Dabir D.V., Swanson E.*, Lee V.M., and Trojanowski J.Q. (2005) Transgenic mouse model of tau pathology in astrocytes leading to nervous system degeneration. J Neurosci 25 (14): 3539-3550
Dabir D.V., Trojanowski J.Q., Richter-Landsberg C., Lee V.M., and Forman M.S. (2004) Expression of the small heat-shock protein alpha B-crystallin in tauopathies with glial pathology. Am J Pathol. 164 (1):155-166
Forman M.S., Lal D., Zhang B., Dabir D.V., Swanson E.*, Lee V.M., and Trojanowski J.Q. (2005) Transgenic mouse model of tau pathology in astrocytes leading to nervous system degeneration. J Neurosci 25 (14): 3539-3550
2006 - 2010
Dabir D.V., Robinson M.B., Swanson E.*, Zhang B., Trojanowski J.Q., Lee V.M., and Forman M.S. (2006). Impaired glutamate transport in a mouse model of tau pathology in astrocytes. J Neurosci 26 (2): 644-654
Dabir D.V., Leverich E.P., Kim S.K., Tsai F.D.*, Hirasawa M., Knaff D.B., and Koehler C.M. (2007) A role of cytochrome c and cytochrome c peroxidase in electron shuttling from Erv1. EMBO J. 26 (23): 4801-4811
Tienson H.L., Dabir D.V., Neal S.E., Loo R., Hasson S.A., Boontheung P., Kim S.K., Loo J.A., and Koehler C.M. (2009) Reconstitution of the mia40-erv1 oxidative folding pathway for the small tim proteins. Mol Biol Cell. 20 (15): 3481-3490.doi:10.1091/mbc.E08-10-1062
Hasson S.A., Damoiseaux R., Glavin J.D., Dabir D.V., Walker S.S., and Koehler C.M. (2010) Substrate specificity of the TIM22 mitochondrial import pathway revealed with small molecule inhibitor of protein translocation. PNAS 107 (21): 9578-9583. Doi:10.1073/pnas.0914387107
Dabir D.V., Leverich E.P., Kim S.K., Tsai F.D.*, Hirasawa M., Knaff D.B., and Koehler C.M. (2007) A role of cytochrome c and cytochrome c peroxidase in electron shuttling from Erv1. EMBO J. 26 (23): 4801-4811
Tienson H.L., Dabir D.V., Neal S.E., Loo R., Hasson S.A., Boontheung P., Kim S.K., Loo J.A., and Koehler C.M. (2009) Reconstitution of the mia40-erv1 oxidative folding pathway for the small tim proteins. Mol Biol Cell. 20 (15): 3481-3490.doi:10.1091/mbc.E08-10-1062
Hasson S.A., Damoiseaux R., Glavin J.D., Dabir D.V., Walker S.S., and Koehler C.M. (2010) Substrate specificity of the TIM22 mitochondrial import pathway revealed with small molecule inhibitor of protein translocation. PNAS 107 (21): 9578-9583. Doi:10.1073/pnas.0914387107
2011 - 2015
Bourens M., Dabir D.V., Tienson H.L., Sorokina I., Koehler C.M., and Barrientos A. (2012) Role of twin Cys-Xaa9-Cys motif cysteines in mitochondrial import of the cytochrome C oxidase biogenesis factor Cmc1. J Biol Chem, 287 (37): 31258-31269. Doi:10.1074/jbc.M112.383562
Dabir D.V., Hasson S.A., Setoguchi K, Johnson M.E., Wongkongkathep P, Douglas C.J., Zimmermann J*, Damoiseaux R., Teitell M.A., and Koehler C.M.(2013) A small molecule inhibitor of redox-regulated protein translocation into mitochondria. Dev Cell, 25 (1): 81-92. Doi:10.1016/j.devcel.2013.03.006
Arango N. A., Li L., Dabir D.V., Nicolau F., Pieretti-Vanmarcke R., Koehler C. M., McCarrey J.R., Lu N., Donahue P. K. (2013) Meiosis I arrest abnormalities lead to severe oligozoospermia in meosis I arresting protein (M1ap)-deficient mice. Biol Reprod 88 (3): 76.doi:10.1095/biolreprod.111.098673
Neal S.E., Dabir D.V., Tienson H.L., Horn D.M., Glaser K*, Ogozalek Loo R.R., Barrientos A, Koehler C.M. (2015) Mia40 Protein serves as an electron sink in the Mia40-Erv1 import pathway. J Biol Chem, 290 (34): 20804-20814. doi:10.1074/jbc.M115.669440
Dabir D.V., Hasson S.A., Setoguchi K, Johnson M.E., Wongkongkathep P, Douglas C.J., Zimmermann J*, Damoiseaux R., Teitell M.A., and Koehler C.M.(2013) A small molecule inhibitor of redox-regulated protein translocation into mitochondria. Dev Cell, 25 (1): 81-92. Doi:10.1016/j.devcel.2013.03.006
Arango N. A., Li L., Dabir D.V., Nicolau F., Pieretti-Vanmarcke R., Koehler C. M., McCarrey J.R., Lu N., Donahue P. K. (2013) Meiosis I arrest abnormalities lead to severe oligozoospermia in meosis I arresting protein (M1ap)-deficient mice. Biol Reprod 88 (3): 76.doi:10.1095/biolreprod.111.098673
Neal S.E., Dabir D.V., Tienson H.L., Horn D.M., Glaser K*, Ogozalek Loo R.R., Barrientos A, Koehler C.M. (2015) Mia40 Protein serves as an electron sink in the Mia40-Erv1 import pathway. J Biol Chem, 290 (34): 20804-20814. doi:10.1074/jbc.M115.669440
2016 - 2020
Momcilovic, M, Bailey S.T., Jones A., Waldmann C.M., Li R., Lee J.T., Abdelhady G, Gomez A, Holloway T, Schmid E., Stout D., Fishbein M.C., Stiles L, Deepa D. V.,, Dubinett S.M., Christofk H, Koehler C.M., Shirihai O., Sadeghi S. and Shackelford D.B. (2019) In vivo imaging of mitochondrial membrane potential in non-small cell lung cancer. Nature, 575(7782):380-384. doi: 10.1038/s41586-019-1715-0
Nguyen K.H.*, Nguyen A.H.*, Dabir D.V. (2017) Clinical Implications of Augmenter of Liver Regeneration in Cancer: A Systematic Review. Anticancer Res. 37(7):3379-3383. doi:10.21873/anticanres.11704
Neal S.E., Dabir D.V., Wijaya. J., Boon. C.*, Koehler C.M. (2017) Osm1 facilitates the transfer of electrons from Erv1 to fumarate in the redox-regulated import pathway in the mitochondrial intermembrane space. Mol Biol Cell, 28(21):2773-2785. doi: 10.1091/mbc.E16-10-0712
Nguyen K.H.*, Nguyen A.H.*, Dabir D.V. (2017) Clinical Implications of Augmenter of Liver Regeneration in Cancer: A Systematic Review. Anticancer Res. 37(7):3379-3383. doi:10.21873/anticanres.11704
Neal S.E., Dabir D.V., Wijaya. J., Boon. C.*, Koehler C.M. (2017) Osm1 facilitates the transfer of electrons from Erv1 to fumarate in the redox-regulated import pathway in the mitochondrial intermembrane space. Mol Biol Cell, 28(21):2773-2785. doi: 10.1091/mbc.E16-10-0712